Upper-Division

METX 100 Introduction to Microbiology

Introduces the biology of microorganisms (bacteria, archaea, viruses, fungi, and unicellular eukaryotes), with an emphasis on bacteria. Topics include microbial cell structure and function, physiology, metabolism, genetics, and diversity. Also considers the role of microbes in human health, the environment, biotechnology, and food production. Students cannot receive credit for both this course and METX 119.

Credits

5

Instructor

Jacqueline Kimmey, Michael Patnode

Requirements

Prerequisite(s): BIOL 20A or ESCI 30. First pass enrollment is restricted to declared Microbiology majors. Second pass enrollment is restricted to declared Microbiology, Biochemistry and Molecular Biology; Biology B.S.; Molecular, Cell and Developmental Biology, and Neuroscience majors; Other majors may enroll by permission of the instructor.

METX 101 Sources and Fates of Pollutants

Presents in-depth important principles of environmental toxicology related to the introduction, transport, and fate of toxicants in aquatic and terrestrial environments, including environmental chemistry and biogeochemical cycles as well as exposure pathways and uptake by organisms. Additional emphasis placed on susceptibility and effects of toxicants across organ systems, toxicokinetic and biomarkers of exposure, and effects at the ecosystem level. Students cannot receive credit for this course and METX 201.

Credits

5

Instructor

The Staff, Chad Saltikov

METX 102 Cell and Molecular Toxicology

Emphases of biochemical, cellular, and organ system basis of intoxication, including dose-response relationships, biotransformation of toxicants, biochemical mechanisms underlying toxicity, factors influencing toxic action, and biomarkers of exposure. Emphasizes effects of various classes of toxins, including heavy metals and persistent synthetic organics, with a focus on susceptible biochemical/cellular processes of the central nervous, immune, hepatic, and renal target organ systems. Designed for advanced undergraduates. Students cannot receive credit for this course and METX 202. (Formerly Cellular and Organismal Toxicology.)

Credits

5

Instructor

Donald Smith, Chad Saltikov, Raquel Chamorro-Garcia

Requirements

Prerequisite(s): BIOL 20A and BIOE 20B or equivalent; BIOL 100 and BIOC 110 recommended. Enrollment restricted to juniors and seniors.

METX 115 Environmental Health Science

Addresses challenges related to environmental health, their impact on the health of biological structures, and humans as active elements in the process of environmental degradation, and as passive elements as well. Students discuss events as case studies of environmental health that contributed to environmental protection, and disease control and prevention. Course involves collaborative endeavor in which students develop a group assignment throughout the 10 weeks of the course that is evaluated at the end of the course.

Credits

5

Instructor

Raquel Chamorro-Garcia

Requirements

Prerequisite(s): BIOL 20A or ENVS 23 or BIOL 89.

General Education Code

PR-E

METX 119L Microbiology Laboratory

An introduction to the principles and practices of laboratory microbiology, with a substantial presentation of optical microscopy.

Credits

5

Instructor

The Staff, Chad Saltikov

Requirements

Prerequisites: Satisfaction of Entry Level Writing and Composition requirements; and one course from the following: BIOL 20L, or BIOL 101L, or BIOL 102L; and previous or concurrent enrollment in METX 100 or METX 119. First pass enrollment is restricted to declared Microbiology majors. Second pass enrollment is restricted to declared Biochemistry and Molecular Biology; Biology B.S.; Molecular, Cell and Developmental Biology, and Neuroscience majors; Other majors may enroll by permission of the instructor. Students cannot enroll in METX 119L after receiving credit with a 'C' or better in BIOL 100L, BIOL 103L, BIOL 105L, BIOL 106L, BIOL 108L, BIOL 109L, BIOL 115L, BIOL 120L, BIOL 121L, BIOL 129L, and BIOL 186L.

METX 125 Practicing Safe Science

Introduces research safety principles and practices. Instructors and guest experts discuss research hazards and control measures. Students explore the safe use of research methods and materials via hands-on and outside exercises. Issues include compliance with hazardous waste and other environmental safety regulations.

Credits

2

Instructor

Terra Haddad

Quarter offered

Winter

METX 133 Medical Microbiology

Covers the biology and experimental characterization of and diseases caused by important microbial pathogens, including bacteria, viruses, fungi, and parasites. Introduces basic microbiological characteristics, and then discusses diseases by organ systems, and includes pathogenesis, immunity, host response, transmission, treatments, and prevention. Students will watch two lectures per week in advance of the Monday and Wednesday course meetings, then participate in active learning activities to go over the lecture material. During the Friday class meeting students either carry out lab exercises, or a topic discussion. The Friday class will be scheduled in conjunction with a required section to create a two-hour time block.

Credits

5

Instructor

Karen Ottemann

Requirements

Prerequisite(s): BIOL 20A.

General Education Code

SI

Quarter offered

Spring

METX 135 Functional Anatomy

A rigorous systems-based course in anatomy. Lectures provide an overview of functional anatomy at all levels from the systems to the tissues. Provides a mechanistic understanding of the structures of the body as a foundation for human-health oriented studies.

Credits

5

Instructor

Manel Camps, The Staff

Requirements

Prerequisite(s): BIOL 20A and BIOE 20B. Concurrent enrollment in METX 135L is required. Enrollment restricted to biological sciences majors and affiliated majors and biology minors.

Quarter offered

Spring, Summer

METX 135C Cadaver Dissection Laboratory

Dissection of a human cadaver under the direction of an anatomy instructor.

Credits

2

Instructor

Manel Camps, The Staff

Requirements

Prerequisite(s): METX 135 and METX 135L, or ANTH 102A.

Repeatable for credit

Yes

Quarter offered

Winter

METX 135L Functional Anatomy Lab

Complements lecture course 135. Emphasizes nomenclature and recognition; includes the embryology and histology of bones, muscles, and internal organs, and the interactions between the systems of the body.

Credits

3

Instructor

Manel Camps, The Staff

Requirements

Prerequisite(s): BIOL 20A and BIOE 20B. The class is geared toward students in the biological sciences majors and affiliated majors and biology minors, but open to other majors. Concurrent enrollment in METX 135 is required.

Quarter offered

Spring, Summer

METX 140 Molecular Biology and Microbial Genetics

Introduces students to the field of molecular biology and microbial genetics. Covers the following topics: molecular mechanisms of DNA replication, transcription, translation, regulatory systems controlling replication, transcription, and translation; basic genetic principles with an emphasis on bacterial genetics; molecular biology and microbial genetics approaches used to understand the molecular mechanisms of interaction of microorganisms with their surroundings and other organisms; and experimental methods employing molecular biology and molecular genetics and biotechnology applications which have arisen from discoveries of bacterial mechanisms.

Credits

5

Instructor

Fitnat Yildiz

Requirements

Prerequisite(s): BIOL 100 or BIOC 100A.

Quarter offered

Spring

METX 150 Applied and Environmental Microbiology

Surveys both fundamental and applied topics relevant to understanding how microbes interact with their environments. The goal of the course is to gain a molecular, biological, and ecological understanding of microbial processes and methods relating to microbe-environment interactions. Although not required, completion of METX 100 is recommended to ensure success in this course.

Credits

5

Instructor

Chad Saltikov

Requirements

Prerequisite(s): BIOL 20A.

General Education Code

PE-E

Quarter offered

Fall

METX 195 Senior Thesis

An individually supervised course, with emphasis on independent research culminating in a senior thesis.

Credits

5

Repeatable for credit

Yes

Quarter offered

Fall, Winter, Spring

METX 195F Senior Thesis

An individually supervised course with emphasis on independent research culminating in a senior thesis.

Credits

2

Repeatable for credit

Yes

Quarter offered

Fall, Winter, Spring

METX 198 Independent Study

Provides for individual programs of study (a) by means other than the usual supervision in person or (b) when the student is doing all or most of the coursework off campus. With permission of the department, two or three courses may be taken concurrently, or the course repeated for credit.

Credits

5

Repeatable for credit

Yes

Quarter offered

Fall, Winter, Spring

METX 198F Independent Study

Provides for individual programs of study (a) by means other than the usual supervision in person or (b) when the student is doing all or most of the coursework off campus. With permission of the department, two or three courses may be taken concurrently, or the course repeated for credit.

Credits

2

Repeatable for credit

Yes

Quarter offered

Fall, Winter, Spring

METX 199 Tutorial

Reading, discussion, written reports, and laboratory research on selected topics.

Credits

5

Repeatable for credit

Yes

Quarter offered

Fall, Winter, Spring

METX 199F Tutorial

Reading, discussion, written reports, and laboratory research on selected topics.

Credits

2

Repeatable for credit

Yes

Quarter offered

Fall, Winter, Spring